Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1194
candidate regulatory elements
825
target gene predictions
647
accessible chromatin
636
chromatin state
570
gene expression
255
histone modifications
157
differential activity
129
eQTL
128
binding sites
112
variant allelic effects
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1684
September, 2022
996
February, 2021
332
November, 2021
286
May, 2021
281
September, 2023
178
February, 2024
126
May, 2020
103
June, 2020
85
August, 2021
76
January, 2022
70
March, 2020
61
March, 2023
56
January, 2020
56
January, 2021
46
February, 2020
42
May, 2022
41
May, 2024
30
February, 2023
29
October, 2022
28
March, 2024
26
November, 2022
19
April, 2020
19
August, 2017
12
October, 2019
9
August, 2018
9
November, 2019
8
April, 2019
5
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3207
bed bed3+
737
tsv
584
bed bed9
509
bigWig
108
txt
29
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4680
Homo sapiens
Biosample type
2474
primary cell
2274
cell line
2252
tissue
466
in vitro differentiated cells
3
stem cell
Organ
890
epithelium
610
kidney
brain
384
connective tissue
356
musculature of body
256
vasculature
255
intestine
247
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
122
liver
119
stomach
93
eye
84
small intestine
83
adipose tissue
73
adrenal gland
71
artery
70
placenta
64
ureter
57
embryo
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
20
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
4028
AMP
332
ENCODE
281
KPMP
59
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
3909
hg19
1328
GRCh38
hg18
assembly!
hg18
organ_slims!
brain
thymus
BIOSAMPLE
TYPE
4726 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
differential activity
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
primary cell
monocyte
2
18
15
86
4
1
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
4
1
3
30
B cell
17
10
6
8
2
endothelial cell
3
7
15
9
1
1
2
2
2
+ See 441 more…
tissue
heart
37
20
5
21
3
1
1
2
stomach
40
21
3
19
1
1
1
kidney
29
14
10
16
7
2
1
1
1
lung
33
17
16
1
1
muscle of arm
33
16
1
16
1
+ See 199 more…
See all biosamples
Download