Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1261
candidate regulatory elements
864
target gene predictions
684
chromatin state
675
accessible chromatin
586
gene expression
299
histone modifications
157
differential activity
155
eQTL
136
binding sites
127
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
Date released
1798
September, 2022
1076
February, 2021
329
November, 2021
286
May, 2021
281
September, 2023
178
February, 2024
143
May, 2020
114
June, 2020
105
March, 2020
91
January, 2022
85
August, 2021
84
January, 2020
61
February, 2020
61
March, 2023
56
January, 2021
42
May, 2022
41
May, 2024
31
October, 2022
30
February, 2023
29
March, 2024
26
November, 2022
24
August, 2017
19
April, 2020
12
October, 2019
9
August, 2018
9
May, 2019
9
November, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3406
bed bed3+
797
tsv
627
bed bed9
526
bigWig
108
txt
34
bigBed bed9
27
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5003
Homo sapiens
Biosample type
2544
tissue
2506
primary cell
2351
cell line
470
in vitro differentiated cells
4
stem cell
Organ
890
epithelium
610
kidney
384
brain
384
connective tissue
356
musculature of body
256
vasculature
255
intestine
247
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
122
liver
119
stomach
93
eye
small intestine
83
adipose tissue
73
adrenal gland
71
artery
70
placenta
64
ureter
57
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
20
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
4355
AMP
329
ENCODE
281
KPMP
59
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
4195
hg19
1445
GRCh38
hg18
assembly!
hg18
organ_slims!
nerve
small intestine
BIOSAMPLE
TYPE
5050 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
differential activity
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
tissue
heart
37
20
21
5
3
1
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
7
2
1
1
1
brain
29
16
18
2
1
3
2
1
1
lung
33
17
16
1
1
+ See 257 more…
primary cell
monocyte
2
18
15
86
4
1
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
5
1
4
3
30
B cell
17
10
8
6
2
endothelial cell
3
7
15
9
1
1
2
2
2
+ See 448 more…
See all biosamples
Download