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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
single cell RNA-seq
28
total RNA-seq
6
WGBS
Assay category
102
Transcription
6
DNA methylation
Date released
37
July, 2018
33
April, 2018
26
September, 2018
6
February, 2021
3
August, 2018
2
October, 2018
1
June, 2018
Available data
258
fastq
194
bam
192
bigWig
108
tsv
80
zippedFastqFolder
68
bed narrowPeak
22
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
Organism
108
Homo sapiens
Biosample type
275
tissue
108
primary cell
34
cell line
Organ
116
epithelium
108
pancreas
15
connective tissue
6
kidney
5
liver
4
heart
3
brain
2
adipose tissue
2
artery
2
blood vessel
2
musculature of body
2
vasculature
1
pericardium
Project
102
AMP
6
HPAP
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
102
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
5
inconsistent ontology term
assembly!
hg18
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
108 results
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single cell RNA-seq
total RNA-seq
WGBS
primary cell
pancreatic alpha cell
12
10
6
pancreatic beta cell
12
10
pancreatic acinar cell
12
4
pancreatic ductal cell
10
4
pancreatic delta cell
11
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