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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
4
ChIP-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
150
February, 2021
8
February, 2023
4
October, 2019
1
March, 2020
May, 2021
Available data
88
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
163
Homo sapiens
Biosample type
163
tissue
Organ
885
pancreas
768
liver
680
connective tissue
497
epithelium
491
adipose tissue
390
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
158
bone element
141
artery
122
limb
96
musculature of body
61
eye
59
blood
59
bodily fluid
43
nerve
34
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
163
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
163
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
assembly!
hg18
month_released!
May, 2021
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
163 results
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RNA microarray
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
bone element
84
bone tissue
58
islet of Langerhans
4
acetabular part of hip bone
1
1
ilium
1
1
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