Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
5
total RNA-seq
Assay category
63
DNA binding
5
Transcription
Target of assay
transcription factor
38
histone
38
histone modification
25
control
19
broad histone mark
19
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
Date released
710
February, 2021
383
May, 2021
364
August, 2017
341
May, 2020
308
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
61
October, 2018
60
November, 2019
59
September, 2020
52
December, 2017
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
January, 2018
3
June, 2018
1
August, 2022
Available data
68
bam
68
fastq
42
bigWig
37
bed narrowPeak
24
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
68
Homo sapiens
Biosample type
32
in vitro differentiated cells
24
tissue
9
cell line
3
stem cell
Organ
35
liver
17
epithelium
10
embryo
7
spleen
4
blood
4
bodily fluid
Project
68
AMP
Genome assembly (visualization)
47
GRCh38
47
hg19
Lab
68
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
assembly!
hg18
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
68 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
13
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
3
definitive endodermal cell
3
+ See 1 more…
tissue
liver
9
right lobe of liver
8
spleen
7
cell line
HepG2
5
GM12878
4
stem cell
hESC
3
See all biosamples
Download