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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
28
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
95
DNA binding
29
Transcription
14
DNA accessibility
Target of assay
62
histone
62
histone modification
36
broad histone mark
29
control
26
narrow histone mark
15
transcription factor
RNA binding protein
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
63
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
January, 2018
3
June, 2018
1
August, 2022
Available data
137
bam
122
fastq
108
bigWig
80
bed narrowPeak
48
bigBed narrowPeak
28
tsv
1
csv
Organism
138
Homo sapiens
Biosample type
75
primary cell
63
tissue
Organ
119
pancreas
63
epithelium
18
adipose tissue
18
connective tissue
Project
138
AMP
Genome assembly (visualization)
108
GRCh38
108
hg19
Lab
138
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
assembly!
hg18
organ_slims!
adrenal gland
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
138 results
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ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
3
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 1 more…
tissue
body of pancreas
28
endocrine pancreas
16
subcutaneous adipose tissue
10
omental fat pad
8
pancreas
1
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