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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
221
accessible chromatin
162
candidate regulatory elements
153
target gene predictions
92
differential activity
78
chromatin state
56
binding sites
41
variant allelic effects
38
histone modifications
6
eQTL
2
caQTL
Date released
243
February, 2021
223
September, 2022
155
September, 2023
130
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
10
October, 2022
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
4
March, 2024
3
August, 2017
3
January, 2022
3
May, 2022
1
July, 2020
1
November, 2019
Available data
672
bed bed3+
326
tsv
179
bigWig
78
txt
74
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1104
Homo sapiens
Biosample type
881
primary cell
107
cell line
86
tissue
30
in vitro differentiated cells
Organ
959
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
788
AMP
155
KPMP
130
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
750
hg19
274
GRCh38
assembly!
hg18
BIOSAMPLE
TYPE
1104 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 156 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
2
1
1
1
1
RPMI7951
1
2
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 24 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
lower leg skin
6
2
2
skin of body
1
1
1
3
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 6 more…
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