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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
9
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
35
DNA accessibility
9
DNA binding
4
Transcription
Target of assay
9
control
Date released
35
February, 2023
5
October, 2019
2
August, 2021
2
February, 2020
2
February, 2021
2
May, 2019
1
May, 2021
Available data
35
bed narrowPeak
9
bam
4
tsv
2
tagAlign
Organism
49
Homo sapiens
Biosample type
46
tissue
2
cell line
1
primary cell
Organ
287
pancreas
225
kidney
213
epithelium
205
heart
166
liver
122
brain
94
connective tissue
89
bone element
71
blood vessel
71
vasculature
64
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
48
AMP
1
T1D
Genome assembly (visualization)
128
GRCh38
hg19
Lab
48
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assembly!
hg19
assembly!!
hg19
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
49 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
2
primary cell
megakaryocyte
1
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