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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
2
pCHi-C
Assay category
8
DNA accessibility
Date released
8
January, 2021
2
March, 2020
Available data
bam
6
fastq
2
tsv
Organism
10
Homo sapiens
Biosample type
8
primary cell
2
tissue
Organ
234
pancreas
205
kidney
179
epithelium
176
heart
89
bone element
70
liver
65
connective tissue
45
blood vessel
45
vasculature
44
adipose tissue
39
artery
34
brain
26
eye
20
lung
19
musculature of body
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
T1D
2
AMP
Genome assembly (visualization)
hg19
Lab
8
Kyle Gaulton, UCSD
2
AMP-T2D consortium
assembly!
hg19
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bam
BIOSAMPLE
ASSAY
10 results
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snATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
tissue
sigmoid colon
1
small intestine
1
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