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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
9
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
35
DNA accessibility
9
DNA binding
4
Transcription
Target of assay
9
control
Date released
35
February, 2023
5
October, 2019
2
August, 2021
2
February, 2020
2
February, 2021
2
May, 2019
Available data
35
bed narrowPeak
9
bam
4
tsv
2
tagAlign
Organism
48
Homo sapiens
Biosample type
46
tissue
2
cell line
Organ
285
pancreas
223
kidney
213
epithelium
202
heart
165
liver
120
brain
93
connective tissue
89
bone element
70
blood vessel
70
vasculature
64
adipose tissue
48
artery
27
eye
26
limb
22
musculature of body
19
lung
14
blood
bodily fluid
12
nerve
10
spleen
8
embryo
5
vein
4
gonad
4
ovary
4
skeleton
1
bone marrow
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
48
AMP
Genome assembly (visualization)
128
GRCh38
hg19
Lab
48
AMP-T2D consortium
assembly!
hg19
audit.WARNING.category!
inconsistent control run_type
month_released!
March, 2020
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
48 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
2
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