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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
17
WGBS
5
GRO-seq
2
ATAC-seq
Assay category
41
DNA binding
17
DNA methylation
2
DNA accessibility
Target of assay
36
histone
36
histone modification
21
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
40
May, 2024
9
July, 2019
7
November, 2018
5
January, 2018
2
August, 2017
1
August, 2021
1
October, 2017
Available data
394
bam
219
bed narrowPeak
192
tsv
181
fastq
160
tagAlign
157
txt
143
bigWig
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
65
Homo sapiens
Biosample type
58
tissue
5
in vitro differentiated cells
1
cell line
1
stem cell
Organ
46
heart
4
pancreas
2
adipose tissue
2
brain
2
connective tissue
2
spleen
1
blood vessel
1
embryo
1
limb
1
liver
1
musculature of body
1
vasculature
Project
65
AMP
HPAP
Genome assembly (visualization)
hg19
1923
GRCh38
5
hg18
Lab
40
Patrick T. Ellinor, Broad
25
AMP-T2D consortium
assembly!
hg19
award.project!
HPAP
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
WGBS
GRO-seq
ATAC-seq
tissue
left cardiac atrium
40
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
+ See 8 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
neural progenitor cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
HepG2
1
stem cell
hESC
1
See all biosamples
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