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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
16
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
16
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
259
August, 2021
103
August, 2017
96
February, 2021
93
October, 2019
81
May, 2020
76
November, 2017
66
May, 2021
61
February, 2023
40
May, 2024
31
June, 2019
29
March, 2020
25
February, 2020
23
May, 2019
21
May, 2022
17
July, 2019
15
April, 2019
14
May, 2023
10
November, 2020
6
October, 2017
5
December, 2019
4
July, 2018
2
November, 2019
2
October, 2018
1
August, 2022
1
March, 2019
1
October, 2022
Available data
1
bam
1
tagAlign
Organism
66
Homo sapiens
Biosample type
43
in vitro differentiated cells
16
cell line
6
primary cell
1
tissue
Organ
18
pancreas
17
epithelium
Project
66
AMP
17
T1D
Genome assembly (visualization)
hg19
140
GRCh38
Lab
43
Kyle Gaulton, UCSD
23
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assembly!
hg19
files.file_type!
fastq
organ_slims!
gonad
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
primary cell
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
tissue
pancreas
1
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