Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
6
WGBS
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
44
DNA binding
6
DNA methylation
2
Transcription
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
narrow histone mark
Date released
32
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
23
fastq
21
bam
5
tagAlign
3
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
Organism
54
Homo sapiens
Biosample type
54
tissue
1
in vitro differentiated cells
Organ
250
pancreas
218
kidney
188
heart
185
epithelium
97
brain
89
bone element
80
connective tissue
68
blood vessel
68
vasculature
64
liver
55
adipose tissue
46
artery
25
eye
25
limb
21
musculature of body
20
lung
12
nerve
11
spleen
8
blood
8
bodily fluid
7
embryo
4
skeleton
4
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
hg19
423
GRCh38
Lab
55
AMP-T2D consortium
assembly!
hg19
biosample_type!
cell line
month_released!
May, 2020
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
55 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
25
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
3
1
in vitro differentiated cells
white fat cell
1
Download