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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
357
bam
212
bed narrowPeak
167
fastq
159
tagAlign
157
txt
150
tsv
136
bigWig
72
bigBed narrowPeak
64
xls
17
bed bedMethyl
17
bed broadPeak
17
bigBed bedMethyl
16
bed bed3+
16
bigBed broadPeak
6
csv
2
bedpe bed3+
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
157
AMP
Genome assembly (visualization)
hg19
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assembly!
hg19
biosample_type!
primary cell
month_released!
March, 2020
November, 2019
BIOSAMPLE
ASSAY
157 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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