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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
18
total RNA-seq
13
ATAC-seq
4
pCHi-C
Assay category
58
DNA binding
18
Transcription
13
DNA accessibility
Target of assay
36
control
22
histone
22
histone modification
21
narrow histone mark
1
broad histone mark
Date released
258
August, 2021
123
August, 2017
119
November, 2017
96
February, 2021
89
October, 2019
72
February, 2023
49
May, 2021
47
September, 2023
35
May, 2024
32
March, 2020
29
October, 2018
27
May, 2022
25
February, 2020
24
May, 2020
22
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
16
June, 2019
14
April, 2019
14
May, 2023
13
November, 2018
10
November, 2020
10
October, 2017
8
February, 2018
8
January, 2021
5
December, 2018
5
December, 2019
5
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
37
bam
9
tagAlign
Organism
93
Homo sapiens
Biosample type
83
tissue
10
cell line
primary cell
Organ
21
eye
17
limb
14
pancreas
11
nerve
8
brain
5
artery
5
blood vessel
5
kidney
5
vasculature
4
gonad
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
1
skin of body
Project
93
AMP
Genome assembly (visualization)
hg19
294
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assembly!
hg19
biosample_type!
primary cell
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
21
18
13
4
tibial nerve
11
tibial artery
5
kidney
2
central medial thalamic nucleus
1
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cell line
Panc1
7
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
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