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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
total RNA-seq
13
ChIP-seq
4
pCHi-C
1
ATAC-seq
Assay category
20
Transcription
13
DNA binding
1
DNA accessibility
Target of assay
11
control
2
histone
2
histone modification
2
narrow histone mark
Date released
32
October, 2019
4
February, 2023
2
February, 2020
Available data
11
bam
6
tsv
Organism
38
Homo sapiens
Biosample type
38
tissue
primary cell
Organ
214
kidney
202
heart
165
liver
127
pancreas
122
brain
90
connective tissue
88
bone element
65
adipose tissue
65
blood vessel
65
vasculature
48
artery
34
epithelium
26
eye
26
limb
21
musculature of body
20
lung
12
nerve
11
spleen
8
embryo
6
blood
6
bodily fluid
5
gonad
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
38
AMP
Genome assembly (visualization)
hg19
34
GRCh38
Lab
38
AMP-T2D consortium
assembly!
hg19
biosample_type!
primary cell
organ_slims!
ovary
BIOSAMPLE
ASSAY
38 results
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total RNA-seq
ChIP-seq
pCHi-C
ATAC-seq
tissue
islet of Langerhans
14
2
4
1
tibial nerve
1
11
retina
3
pigmented layer of retina
2
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