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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
pCHi-C
2
total RNA-seq
1
ATAC-seq
Assay category
2
Transcription
1
DNA accessibility
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
31
June, 2019
29
October, 2018
28
March, 2020
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
4
January, 2018
4
January, 2019
4
July, 2018
4
September, 2017
3
March, 2023
2
November, 2019
1
August, 2018
1
August, 2022
1
March, 2019
1
October, 2022
1
September, 2018
Available data
26
tsv
1
bam
1
bed broadPeak
1
fastq
Organism
29
Homo sapiens
Biosample type
23
tissue
4
cell line
stem cell
2
in vitro differentiated cells
Organ
4
pancreas
3
heart
2
brain
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vasculature
Project
27
AMP
2
T1D
Genome assembly (visualization)
hg19
18
GRCh38
Lab
28
AMP-T2D consortium
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
5
inconsistent ontology term
assembly!
hg19
biosample_type!
stem cell
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
29 results
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pCHi-C
total RNA-seq
ATAC-seq
tissue
islet of Langerhans
2
1
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
+ See 16 more…
cell line
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
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