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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
DNase-seq
1
ATAC-seq
Assay category
24
DNA accessibility
Date released
23
June, 2019
1
March, 2019
Available data
339
fastq
327
bam
198
tsv
157
txt
153
zippedFastqFolder
122
bed narrowPeak
66
tagAlign
64
xls
57
bigWig
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
23
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
24
Homo sapiens
Biosample type
17
tissue
7
primary cell
Organ
10
brain
7
kidney
6
epithelium
3
heart
3
pancreas
1
blood vessel
1
connective tissue
1
vasculature
Project
24
AMP
Genome assembly (visualization)
206
GRCh38
hg19
Lab
23
AMP-T2D consortium
1
Mark McCarthy, Oxford
assembly!
hg19
files.file_type!
csv
target.investigated_as!
histone modification
transcription factor
BIOSAMPLE
ASSAY
24 results
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DNase-seq
ATAC-seq
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
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primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
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