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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 99ATAC-seq
  • 97ChIP-seq
  • 23DNase-seq
Assay category
  • 122DNA accessibility
  • 97DNA binding
Target of assay
  • 88histone
  • 88histone modification
  • 57broad histone mark
  • 31narrow histone mark
  • 9transcription factor
  • 6RNA binding protein
  • 3recombinant protein
Date released
  • 65August, 2021
  • 54November, 2017
  • 40May, 2024
  • 35February, 2023
  • 23June, 2019
  • 2November, 2018
Available data
  • 394bam
  • 350fastq
  • 219bed narrowPeak
  • 198tsv
  • 160tagAlign
  • 157txt
  • 153bigWig
  • 153zippedFastqFolder
  • 79bigBed narrowPeak
  • 64xls
  • 24bed broadPeak
  • 23bed bed3+
  • 23bigBed broadPeak
  • 17bed bedMethyl
  • 17bigBed bedMethyl
  • 8csv
  • 2bedpe bed3+
  • 1hic
  • 1vcf
Organism
  • 219Homo sapiens
Biosample type
  • 207tissue
  • 7primary cell
  • 4cell line
  • 1in vitro differentiated cells
Organ
  • 78heart
  • 71kidney
  • 62brain
  • 36blood vessel
  • 36vasculature
  • 35artery
  • 6epithelium
  • 4liver
  • 2pancreas
  • 1connective tissue
Project
  • 219AMP
Genome assembly (visualization)
  • 1632GRCh38
  • hg19
Lab
  • 115AMP-T2D consortium
  • 64Katalin Susztak, Upenn
  • 40Patrick T. Ellinor, Broad
assembly!
  • hg19
BIOSAMPLE
ASSAY

219 results

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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
tissue
kidney64
left cardiac atrium40
coronary artery35
layer of hippocampus16
caudate nucleus111
primary cell
glomerular visceral epithelial cell2
kidney tubule cell2
cardiac fibroblast1
kidney capillary endothelial cell1
kidney glomerular epithelial cell1
cell line
HepG24
in vitro differentiated cells
neural progenitor cell1
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