Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 81ChIP-seq
  • 1Hi-C
Assay category
  • 81DNA binding
  • 13D chromatin structure
Target of assay
  • 74control
  • 7transcription factor
  • 4recombinant protein
  • 2RNA binding protein
Date released
  • 43November, 2017
  • 12October, 2018
  • 8December, 2017
  • 7August, 2017
  • 7November, 2018
  • 3January, 2019
  • 1December, 2018
  • 1October, 2017
Available data
  • 82fastq
  • 81bam
  • 3bed narrowPeak
  • 3bigBed narrowPeak
  • 3bigWig
  • 2tagAlign
Organism
  • 81Homo sapiens
Biosample type
  • 51cell line
  • 31tissue
Organ
  • 59liver
  • 12adipose tissue
  • 12connective tissue
  • 4blood
  • 4bodily fluid
  • 3pancreas
  • 3spleen
  • 1brain
Project
  • 82AMP
Genome assembly (visualization)
  • hg19
  • 477GRCh38
Lab
  • 82AMP-T2D consortium
Audit category:
  • 1missing controlled_by
assembly!
  • hg19
BIOSAMPLE
ASSAY

82 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
Hi-C
cell line
HepG2461
GM128784
tissue
liver12
subcutaneous adipose tissue7
omental fat pad4
spleen3
pancreas2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego