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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
10
ATAC-seq
1
single cell RNA-seq
Assay category
26
DNA binding
10
DNA accessibility
1
Transcription
Target of assay
22
control
4
recombinant protein
4
transcription factor
Date released
12
October, 2018
7
August, 2020
7
November, 2018
4
September, 2020
3
November, 2017
2
December, 2017
1
August, 2017
1
January, 2019
Available data
36
fastq
26
bam
13
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
1
zippedFastqFolder
Organism
37
Homo sapiens
Biosample type
17
tissue
11
primary cell
7
cell line
2
in vitro differentiated cells
Organ
13
pancreas
11
epithelium
10
connective tissue
9
adipose tissue
8
liver
4
spleen
1
blood
1
bodily fluid
Project
26
AMP
11
HPAP
Genome assembly (visualization)
180
GRCh38
hg19
Lab
26
AMP-T2D consortium
11
Klaus Kaestner, Upenn
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
omental fat pad
5
spleen
4
subcutaneous adipose tissue
4
body of pancreas
3
right lobe of liver
1
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
Langerhans cell
1
cell line
HepG2
6
GM12878
1
in vitro differentiated cells
adipocyte
1
hepatocyte
1
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