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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
20
single cell RNA-seq
16
snATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
91
DNA accessibility
73
Transcription
Date released
127
August, 2021
19
April, 2020
14
May, 2023
4
March, 2023
Available data
64
bed narrowPeak
64
xls
57
txt
Organism
159
Homo sapiens
Biosample type
160
tissue
2
cell line
2
stem cell
Organ
141
kidney
19
lung
Project
141
AMP
19
LungMap
4
community
Genome assembly (visualization)
75
GRCh38
hg19
Lab
987
AMP-T2D consortium
321
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
105
Kyle Gaulton, UCSD
47
KPMP
40
Patrick T. Ellinor, Broad
21
Bing Ren, UCSD
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
assembly!
hg19
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
164 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
kidney
75
49
11
6
lung
9
10
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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