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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
35
ATAC-seq
18
ChIP-seq
8
WGBS
3
pCHi-C
3
total RNA-seq
2
DNase-seq
Assay category
96
Transcription
37
DNA accessibility
18
DNA binding
8
DNA methylation
Target of assay
18
control
Date released
92
August, 2021
May, 2024
36
February, 2023
10
April, 2019
8
July, 2019
6
May, 2019
3
February, 2020
3
March, 2020
2
February, 2021
2
June, 2019
Available data
98
tsv
37
bed narrowPeak
26
bam
8
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
tagAlign
Organism
162
Homo sapiens
Biosample type
160
tissue
2
cell line
Organ
288
pancreas
kidney
213
epithelium
166
liver
165
heart
122
brain
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
162
AMP
Genome assembly (visualization)
217
GRCh38
hg19
Lab
162
AMP-T2D consortium
assembly!
hg19
month_released!
May, 2024
organ_slims!
connective tissue
kidney
BIOSAMPLE
ASSAY
162 results
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single cell RNA-seq
ATAC-seq
ChIP-seq
WGBS
pCHi-C
total RNA-seq
DNase-seq
tissue
coronary artery
35
2
1
heart left ventricle
18
6
4
1
heart right ventricle
17
2
2
1
right cardiac atrium
18
1
1
1
left cardiac atrium
18
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cell line
smooth muscle cell of the coronary artery
2
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