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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
20
total RNA-seq
3
ATAC-seq
1
pCHi-C
Assay category
60
Transcription
3
DNA accessibility
Date released
253
August, 2021
161
May, 2022
139
February, 2021
135
August, 2017
125
February, 2023
125
November, 2017
87
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
31
March, 2020
30
June, 2019
29
October, 2018
22
February, 2020
19
April, 2020
17
December, 2017
17
November, 2018
16
January, 2021
15
April, 2019
15
July, 2019
14
May, 2023
12
May, 2019
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
42
fastq
19
zippedFastqFolder
3
bigWig
1
bedpe bed3+
Organism
64
Homo sapiens
Biosample type
59
primary cell
4
tissue
1
in vitro differentiated cells
Organ
23
pancreas
19
epithelium
1
adipose tissue
1
connective tissue
Project
59
HPAP
5
AMP
Genome assembly (visualization)
170
GRCh38
hg19
Lab
59
Klaus Kaestner, Upenn
5
AMP-T2D consortium
assembly!
hg19
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
64 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
pCHi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
in vitro differentiated cells
white fat cell
1
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