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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
7
WGBS
1
pCHi-C
1
single cell RNA-seq
Assay category
134
DNA binding
7
DNA methylation
1
Transcription
Target of assay
64
histone
64
histone modification
61
control
40
broad histone mark
24
narrow histone mark
9
transcription factor
4
recombinant protein
3
RNA binding protein
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
128
bam
67
fastq
62
bigWig
60
tagAlign
56
bed narrowPeak
56
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
bedpe bed3+
1
csv
Organism
143
Homo sapiens
Biosample type
85
tissue
56
cell line
1
in vitro differentiated cells
1
primary cell
Organ
76
brain
53
liver
5
spleen
4
pancreas
3
blood
3
bodily fluid
1
adipose tissue
1
connective tissue
Project
143
AMP
Genome assembly (visualization)
362
GRCh38
hg19
Lab
143
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
single cell RNA-seq
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 4 more…
cell line
HepG2
52
1
GM12878
3
in vitro differentiated cells
white fat cell
1
primary cell
pancreatic cell
1
See all biosamples
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