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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
8
snATAC-seq
1
ChIP-seq
1
total RNA-seq
Assay category
24
DNA accessibility
1
DNA binding
1
Transcription
Target of assay
1
control
Date released
86
May, 2022
56
February, 2023
29
August, 2017
19
September, 2020
18
May, 2021
11
October, 2018
10
November, 2020
10
October, 2019
8
January, 2021
7
August, 2020
6
February, 2021
4
August, 2021
4
July, 2018
4
November, 2018
4
September, 2017
3
March, 2020
2
June, 2019
2
March, 2019
2
November, 2019
1
August, 2022
1
February, 2020
1
May, 2019
Available data
1
bam
1
tagAlign
Organism
26
Homo sapiens
Biosample type
16
cell line
9
tissue
1
in vitro differentiated cells
Organ
26
pancreas
17
epithelium
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
18
AMP
8
T1D
Genome assembly (visualization)
43
GRCh38
hg19
Lab
17
AMP-T2D consortium
9
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
26 results
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ATAC-seq
snATAC-seq
ChIP-seq
total RNA-seq
cell line
EndoC_BH1
16
tissue
pancreas
4
1
islet of Langerhans
4
in vitro differentiated cells
pancreatic PP cell
1
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