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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42ChIP-seq
  • 17pCHi-C
  • 16ATAC-seq
  • 7total RNA-seq
  • 1DNAme array
Assay category
  • 42DNA binding
  • 16DNA accessibility
  • 7Transcription
  • 1DNA methylation
Target of assay
  • 24histone
  • 24histone modification
  • 12broad histone mark
  • 12narrow histone mark
  • 12transcription factor
  • 6control
  • 5RNA binding protein
Date released
  • 259August, 2021
  • 161May, 2022
  • 160February, 2023
  • 141February, 2021
  • 135August, 2017
  • 125November, 2017
  • 97October, 2019
  • 83May, 2021
  • 81May, 2020
  • 59September, 2020
  • 47September, 2023
  • 40May, 2024
  • 32March, 2020
  • 31June, 2019
  • 29October, 2018
  • 25February, 2020
  • 23May, 2019
  • 19April, 2020
  • 17December, 2017
  • 17July, 2019
  • 17November, 2018
  • 16January, 2021
  • 15April, 2019
  • 14May, 2023
  • 10November, 2020
  • 10October, 2017
  • 8February, 2018
  • 7August, 2020
  • 5December, 2018
  • 5December, 2019
  • 5January, 2018
  • 5March, 2023
  • 4January, 2019
  • 4July, 2018
  • 4September, 2017
  • 2March, 2019
  • 2November, 2019
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
  • 1September, 2018
Available data
  • 1bam
  • 1tagAlign
Organism
  • 83Homo sapiens
Biosample type
  • 43in vitro differentiated cells
  • 22primary cell
  • 16cell line
  • 2tissue
Organ
  • 18pancreas
  • 17epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 66AMP
  • 17T1D
Genome assembly (visualization)
  • hg19
  • 276GRCh38
Lab
  • 60Kyle Gaulton, UCSD
  • 23AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
assembly!
  • hg19
BIOSAMPLE
ASSAY

83 results

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Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell375
pancreatic PP cell1
primary cell
monocyte1111
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
B cell1
cell line
EndoC_BH116
tissue
pancreas1
thymus1
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