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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
single cell RNA-seq
21
snATAC-seq
20
total RNA-seq
9
ChIP-seq
3
WGBS
Assay category
55
Transcription
21
DNA accessibility
9
DNA binding
3
DNA methylation
Target of assay
6
control
3
recombinant protein
3
transcription factor
Date released
255
August, 2021
135
February, 2021
125
November, 2017
106
August, 2017
104
February, 2023
87
October, 2019
81
May, 2020
75
May, 2022
65
May, 2021
47
September, 2023
40
May, 2024
40
September, 2020
29
June, 2019
29
March, 2020
24
February, 2020
22
May, 2019
19
April, 2020
18
October, 2018
17
December, 2017
17
July, 2019
15
April, 2019
14
May, 2023
13
November, 2018
10
October, 2017
8
February, 2018
8
January, 2021
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
1
August, 2018
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
13
fastq
12
bam
5
bigWig
3
bed bedMethyl
3
bigBed bedMethyl
2
bed narrowPeak
2
bigBed narrowPeak
1
csv
Organism
88
Homo sapiens
Biosample type
55
primary cell
26
tissue
7
cell line
Organ
pancreas
80
epithelium
24
liver
5
spleen
3
blood
3
bodily fluid
1
musculature of body
Project
54
HPAP
34
AMP
Genome assembly (visualization)
hg19
73
GRCh38
Lab
54
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
14
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
hg19
organ_slims!
pancreas
BIOSAMPLE
ASSAY
88 results
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Clear Filters
single cell RNA-seq
snATAC-seq
total RNA-seq
ChIP-seq
WGBS
primary cell
Langerhans cell
33
21
pancreatic cell
1
tissue
liver
20
spleen
3
2
skeletal muscle tissue
1
cell line
HepG2
3
1
GM12878
3
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