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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 64ChIP-seq
  • 14total RNA-seq
  • 13ATAC-seq
  • 4pCHi-C
  • 2DNase-seq
Assay category
  • 64DNA binding
  • 15DNA accessibility
  • 14Transcription
Target of assay
  • 39control
  • 25histone
  • 25histone modification
  • 22narrow histone mark
  • 3broad histone mark
Date released
  • 259August, 2021
  • 161May, 2022
  • 160February, 2023
  • 141February, 2021
  • 135August, 2017
  • 125November, 2017
  • 97October, 2019
  • 83May, 2021
  • 81May, 2020
  • 59September, 2020
  • 47September, 2023
  • 40May, 2024
  • 32March, 2020
  • 31June, 2019
  • 29October, 2018
  • 25February, 2020
  • 23May, 2019
  • 19April, 2020
  • 17December, 2017
  • 17July, 2019
  • 17November, 2018
  • 16January, 2021
  • 15April, 2019
  • 14May, 2023
  • 10November, 2020
  • 10October, 2017
  • 8February, 2018
  • 7August, 2020
  • 5December, 2018
  • 5December, 2019
  • 5January, 2018
  • 5March, 2023
  • 4January, 2019
  • 4July, 2018
  • 4September, 2017
  • 2March, 2019
  • 2November, 2019
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
  • 1September, 2018
Available data
  • 43bam
  • 9tagAlign
Organism
  • 97Homo sapiens
Biosample type
  • 79tissue
  • 10cell line
  • 8primary cell
Organ
  • 21eye
  • 17limb
  • 11nerve
  • 10blood vessel
  • 10pancreas
  • 10vasculature
  • 8brain
  • 8epithelium
  • 8kidney
  • 5artery
  • 5vein
  • 4gonad
  • 4ovary
  • 1connective tissue
  • 1lymph node
  • 1pituitary gland
  • 1skin of body
Project
  • 97AMP
Genome assembly (visualization)
  • hg19
  • 207GRCh38
Lab
  • 97AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
assembly!
  • hg19
BIOSAMPLE
ASSAY

97 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
tissue
islet of Langerhans2114134
tibial nerve11
tibial artery5
kidney2
central medial thalamic nucleus1
cell line
Panc17
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
RCC 7860 vector1
primary cell
endothelial cell of umbilical vein5
epithelial cell of proximal tubule1
kidney glomerular epithelial cell1
kidney tubule cell1
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