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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54ChIP-seq
  • 6WGBS
  • 2pCHi-C
  • 2total RNA-seq
  • 1RNA microarray
Assay category
  • 54DNA binding
  • 6DNA methylation
  • 2Transcription
Target of assay
  • 30histone
  • 30histone modification
  • 24control
  • 20broad histone mark
  • 10narrow histone mark
Date released
  • 42August, 2017
  • 18October, 2018
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1March, 2020
Available data
  • 23fastq
  • 21bam
  • 7tagAlign
  • 3tsv
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 2bigWig
  • 1bedpe bed3+
Organism
  • 64Homo sapiens
Biosample type
  • 64tissue
  • 1in vitro differentiated cells
Organ
  • 288pancreas
  • 225kidney
  • 213epithelium
  • 205heart
  • 166liver
  • 122brain
  • 95connective tissue
  • 89bone element
  • 71blood vessel
  • 71vasculature
  • 65adipose tissue
  • 48artery
  • 27eye
  • 26limb
  • 23musculature of body
  • 20lung
  • 14blood
  • 14bodily fluid
  • 12nerve
  • 11spleen
  • 8embryo
  • 5gonad
  • 5ovary
  • 5vein
  • 4skeleton
  • 2intestine
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 65AMP
Genome assembly (visualization)
  • hg19
  • 424GRCh38
Lab
  • 65AMP-T2D consortium
assembly!
  • hg19
BIOSAMPLE
ASSAY

65 results

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Clear Filters
ChIP-seq
WGBS
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue353
subcutaneous adipose tissue1011
omental fat pad81
adipose tissue131
in vitro differentiated cells
white fat cell1
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