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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
3
MeRIP-seq
Assay category
126
DNA binding
Target of assay
120
control
23
histone
23
histone modification
14
broad histone mark
9
narrow histone mark
9
transcription factor
4
recombinant protein
3
RNA binding protein
3
nucleotide modification
Date released
43
November, 2017
30
August, 2017
23
May, 2020
15
December, 2017
5
August, 2021
4
October, 2019
3
November, 2020
2
June, 2019
2
November, 2019
1
May, 2019
1
May, 2021
Available data
111
bam
77
fastq
34
tagAlign
Organism
129
Homo sapiens
Biosample type
53
tissue
52
cell line
20
primary cell
4
in vitro differentiated cells
Organ
102
liver
55
pancreas
50
brain
49
connective tissue
35
heart
34
adipose tissue
29
epithelium
21
blood vessel
21
vasculature
18
limb
12
kidney
11
nerve
9
artery
8
musculature of body
8
spleen
7
embryo
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
3
vein
1
lymph node
Project
129
AMP
Genome assembly (visualization)
hg19
83
GRCh38
Lab
122
AMP-T2D consortium
4
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
129 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver
50
right lobe of liver
3
cell line
HepG2
47
EndoC_BH1
2
3
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
3
epithelial cell of proximal tubule
2
hepatocyte
1
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in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
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