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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12ChIP-seq
  • 4Hi-C
  • 2RRBS
  • 2total RNA-seq
  • 1WGBS
  • 1pCHi-C
  • 1single cell RNA-seq
Assay category
  • 12DNA binding
  • 43D chromatin structure
  • 3DNA methylation
  • 3Transcription
Target of assay
  • 6control
  • 6histone
  • 6histone modification
  • 4broad histone mark
  • 2narrow histone mark
Date released
  • 11August, 2017
  • 5July, 2019
  • 2February, 2020
  • 2June, 2019
  • 1March, 2020
  • 1May, 2019
  • 1May, 2022
Available data
  • 4bam
  • 3tsv
  • 2tagAlign
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1bigWig
Organism
  • 23Homo sapiens
Biosample type
  • 21tissue
  • 2primary cell
Organ
  • 288pancreas
  • 225kidney
  • 213epithelium
  • 205heart
  • 166liver
  • 122brain
  • 95connective tissue
  • 89bone element
  • 71blood vessel
  • 71vasculature
  • 65adipose tissue
  • 48artery
  • 27eye
  • 26limb
  • 23musculature of body
  • 20lung
  • 14blood
  • 14bodily fluid
  • 12nerve
  • 11spleen
  • 8embryo
  • 5gonad
  • 5ovary
  • 5vein
  • 4skeleton
  • 2intestine
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 23AMP
Genome assembly (visualization)
  • hg19
  • 53GRCh38
Lab
  • 23AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
assembly!
  • hg19
BIOSAMPLE
ASSAY

23 results

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Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
WGBS
pCHi-C
single cell RNA-seq
tissue
skeletal muscle tissue921
gastrocnemius medialis41
muscle of leg11
left ventricle myocardium1
psoas muscle1
primary cell
skeletal muscle cell1
skeletal muscle satellite cell1
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