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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 306ChIP-seq
  • 5MeRIP-seq
Assay category
  • 306DNA binding
Target of assay
  • 311control
  • 233histone
  • 233histone modification
  • 130broad histone mark
  • 103narrow histone mark
  • 27transcription factor
  • 14RNA binding protein
  • 5nucleotide modification
  • 4recombinant protein
Date released
  • 55November, 2017
  • 47August, 2017
  • 39October, 2019
  • 29October, 2018
  • 23May, 2019
  • 23May, 2020
  • 16December, 2017
  • 14April, 2019
  • 12August, 2021
  • 8February, 2018
  • 8June, 2019
  • 6May, 2021
  • 6November, 2018
  • 5November, 2020
  • 4December, 2018
  • 4January, 2019
  • 4September, 2017
  • 3February, 2021
  • 3October, 2017
  • 2November, 2019
Available data
  • 277bam
  • 142fastq
  • 66tagAlign
Organism
  • 310Homo sapiens
Biosample type
  • 184tissue
  • 70cell line
  • 32in vitro differentiated cells
  • 25primary cell
Organ
  • 94liver
  • 51pancreas
  • 34connective tissue
  • 28epithelium
  • 25brain
  • 24adipose tissue
  • 20blood vessel
  • 20heart
  • 20vasculature
  • 17limb
  • 12kidney
  • 11nerve
  • 9artery
  • 8spleen
  • 6blood
  • 6bodily fluid
  • 6embryo
  • 6musculature of body
  • 2vein
  • 1eye
Project
  • 311AMP
Genome assembly (visualization)
  • hg19
  • 12GRCh38
Lab
  • 297AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Rohit N. Kulkarni, M.D., Ph.D.
  • 4Bing Ren, UCSD
Audit category:
  • 15inconsistent ontology term
assembly!
  • hg19
BIOSAMPLE
ASSAY

311 results

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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver42
islet of Langerhans112
tibial nerve11
subcutaneous adipose tissue10
body of pancreas9
cell line
HepG247
GM128786
Panc16
EndoC_BH123
smooth muscle cell of the coronary artery2
in vitro differentiated cells
adipocyte7
neural progenitor cell7
embryonic stem cell6
pancreatic endoderm4
Hepatic endoderm2
primary cell
pancreatic alpha cell6
pancreatic beta cell6
cardiac fibroblast2
endothelial cell of umbilical vein2
epithelial cell of proximal tubule2
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