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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ATAC-seq
96
ChIP-seq
17
WGBS
16
DNase-seq
Assay category
128
DNA accessibility
96
DNA binding
17
DNA methylation
Target of assay
87
histone
87
histone modification
56
broad histone mark
31
narrow histone mark
9
transcription factor
6
RNA binding protein
3
recombinant protein
Date released
64
August, 2021
54
November, 2017
40
May, 2024
35
February, 2023
16
June, 2019
11
May, 2023
9
July, 2019
9
November, 2018
2
August, 2017
1
October, 2017
Available data
211
bed narrowPeak
130
bigWig
91
bam
72
bigBed narrowPeak
64
xls
40
tagAlign
17
bed bedMethyl
17
bigBed bedMethyl
16
bed bed3+
16
bed broadPeak
16
bigBed broadPeak
14
fastq
Organism
241
Homo sapiens
Biosample type
236
tissue
8
primary cell
5
cell line
1
in vitro differentiated cells
Organ
83
heart
76
kidney
64
brain
36
blood vessel
36
vasculature
35
artery
6
pancreas
5
liver
2
adipose tissue
2
connective tissue
2
spleen
1
limb
1
musculature of body
Project
241
AMP
Genome assembly (visualization)
2323
GRCh38
hg19
Lab
126
AMP-T2D consortium
75
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
assembly!
hg19
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
241 results
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ATAC-seq
ChIP-seq
WGBS
DNase-seq
tissue
kidney
75
left cardiac atrium
40
coronary artery
35
layer of hippocampus
16
caudate nucleus
11
1
+ See 26 more…
cell line
HepG2
4
1
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