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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ATAC-seq
92
ChIP-seq
16
DNase-seq
Assay category
128
DNA accessibility
92
DNA binding
Target of assay
87
histone
87
histone modification
56
broad histone mark
31
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
52
November, 2017
40
May, 2024
35
February, 2023
16
June, 2019
11
May, 2023
1
July, 2019
1
October, 2017
Available data
207
bed narrowPeak
125
bigWig
86
bam
68
bigBed narrowPeak
64
xls
40
tagAlign
16
bed bed3+
16
bed bedMethyl
16
bed broadPeak
bigBed bedMethyl
16
bigBed broadPeak
9
fastq
Organism
220
Homo sapiens
Biosample type
220
tissue
8
primary cell
4
cell line
1
in vitro differentiated cells
Organ
77
heart
76
kidney
64
brain
35
artery
35
blood vessel
35
vasculature
2
pancreas
Project
220
AMP
Genome assembly (visualization)
1843
GRCh38
hg19
Lab
105
AMP-T2D consortium
75
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
assembly!
hg19
files.file_type!
bigBed bedMethyl
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
220 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
kidney
75
left cardiac atrium
40
coronary artery
35
layer of hippocampus
16
caudate nucleus
11
1
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