Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
9
WGBS
4
ChIP-seq
Assay category
11
DNA accessibility
9
DNA methylation
4
DNA binding
Target of assay
4
transcription factor
3
recombinant protein
1
RNA binding protein
Date released
9
November, 2018
7
August, 2020
3
September, 2020
2
August, 2017
2
November, 2017
1
October, 2017
Available data
219
bed narrowPeak
148
bigWig
99
bam
79
bigBed narrowPeak
64
xls
41
tagAlign
24
fastq
23
bed bed3+
23
bed broadPeak
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
1
hic
Organism
24
Homo sapiens
Biosample type
10
primary cell
9
tissue
5
cell line
Organ
14
pancreas
10
epithelium
5
liver
2
adipose tissue
2
connective tissue
2
spleen
1
brain
Project
14
AMP
10
HPAP
Genome assembly (visualization)
hg19
951
GRCh38
5
hg18
Lab
14
AMP-T2D consortium
10
Klaus Kaestner, Upenn
assembly!
hg19
files.file_type!
tar
month_released!
May, 2022
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
WGBS
ChIP-seq
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
spleen
2
cerebellum (Hemisphere)
1
cell line
HepG2
1
4
Download