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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
165
candidate regulatory elements
82
chromatin state
79
target gene predictions
51
accessible chromatin
11
variant allelic effects
10
binding sites
7
histone modifications
4
eQTL
Date released
231
September, 2022
102
February, 2021
16
August, 2021
16
January, 2020
15
June, 2020
15
May, 2020
3
November, 2021
3
October, 2022
1
April, 2019
1
August, 2017
1
February, 2020
1
February, 2024
1
January, 2022
1
March, 2020
1
May, 2019
1
May, 2021
Available data
326
bed bed3+
81
bed bed9
37
bigWig
4
bigBed bed9
Organism
409
Homo sapiens
Biosample type
288
tissue
80
primary cell
40
cell line
1
in vitro differentiated cells
Organ
610
epithelium
440
brain
394
connective tissue
388
kidney
368
musculature of body
310
lung
286
intestine
239
limb
234
heart
217
bodily fluid
214
vasculature
206
blood
205
embryo
202
skin of body
190
pancreas
172
large intestine
169
blood vessel
146
extraembryonic component
134
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adipose tissue
72
adrenal gland
65
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
21
vein
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
406
AMP
3
ENCODE
Genome assembly (visualization)
408
hg19
110
GRCh38
BIOSAMPLE
TYPE
409 results
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candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
tissue
kidney
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 12 more…
primary cell
endothelial cell of umbilical vein
6
5
4
2
2
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
1
1
2
1
glomerular endothelial cell
2
1
1
1
1
+ See 14 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 5 more…
in vitro differentiated cells
renal cell carcinoma
1
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