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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
449
total RNA-seq
10
ATAC-seq
1
ChIP-seq
Assay category
449
Transcription
10
DNA accessibility
1
DNA binding
Target of assay
1
transcription factor
Date released
460
February, 2021
278
November, 2017
203
May, 2020
179
June, 2019
165
May, 2021
148
October, 2019
105
August, 2021
97
August, 2017
75
December, 2017
73
November, 2018
67
July, 2019
64
April, 2019
54
May, 2019
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
12
May, 2023
10
April, 2018
10
July, 2018
9
October, 2017
7
March, 2020
6
November, 2020
5
December, 2019
5
October, 2018
1
June, 2018
1
March, 2023
Available data
460
bam
451
bigWig
449
tsv
11
bed narrowPeak
2
bed bed3
1
tagAlign
Organism
460
Homo sapiens
Biosample type
452
tissue
4
in vitro differentiated cells
2
cell line
2
primary cell
Organ
450
connective tissue
386
adipose tissue
66
bone element
64
artery
blood vessel
64
heart
64
vasculature
8
skeleton
6
limb
1
liver
Project
460
AMP
Genome assembly (visualization)
466
hg19
460
GRCh38
Lab
460
AMP-T2D consortium
Audit category:
inconsistent ontology term
1
inconsistent replicate
audit.ERROR.category!
inconsistent ontology term
organ_slims!
blood vessel
pancreas
BIOSAMPLE
ASSAY
460 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
distal epiphysis
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
iPSC derived cell line
1
primary cell
osteoblast
1
1
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