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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
53
Transcription
8
DNA methylation
6
DNA accessibility
Target of assay
3
control
Date released
207
November, 2017
190
June, 2019
190
May, 2021
188
May, 2020
181
February, 2021
164
July, 2018
131
August, 2017
89
August, 2021
78
November, 2018
67
July, 2019
49
April, 2018
47
December, 2017
46
November, 2019
40
September, 2018
38
October, 2019
35
February, 2023
30
December, 2018
19
January, 2019
15
February, 2018
13
March, 2020
12
October, 2018
11
May, 2023
7
August, 2020
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
5
May, 2024
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
67
bam
67
bigWig
53
tsv
8
bed bedMethyl
8
bigBed bedMethyl
5
bed narrowPeak
Organism
67
Homo sapiens
Biosample type
51
tissue
16
primary cell
Organ
21
heart
16
connective tissue
adipose tissue
12
brain
8
blood vessel
8
vasculature
7
liver
6
kidney
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
67
AMP
Genome assembly (visualization)
79
hg19
67
GRCh38
Lab
67
AMP-T2D consortium
audit.ERROR.category!
inconsistent replicate
organ_slims!
adipose tissue
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
2
2
2
body of pancreas
2
2
heart
2
1
1
right lobe of liver
2
2
liver
2
1
+ See 18 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
+ See 9 more…
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