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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
86
histone modification
85
histone
44
broad histone mark
40
narrow histone mark
23
transcription factor
6
RNA binding protein
3
chromatin remodeller
2
control
Date released
202
November, 2017
59
November, 2018
42
December, 2017
28
December, 2018
23
August, 2017
15
October, 2018
14
January, 2019
7
October, 2019
5
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
4
May, 2021
1
November, 2019
Available data
23
bam
23
bed narrowPeak
23
bigWig
23
fastq
9
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
23
Homo sapiens
Biosample type
17
in vitro differentiated cells
5
tissue
1
primary cell
Organ
17
connective tissue
4
liver
1
pancreas
Project
23
AMP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
6
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
17
tissue
liver
4
islet of Langerhans
1
primary cell
skeletal muscle myoblast
1
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