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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
4
ATAC-seq
3
DNase-seq
Assay category
18
DNA binding
7
DNA accessibility
Target of assay
11
transcription factor
7
histone
7
histone modification
5
RNA binding protein
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
6
January, 2019
5
November, 2018
5
October, 2018
3
December, 2018
2
August, 2017
2
October, 2017
1
June, 2019
1
November, 2019
Available data
427
bam
426
bigWig
398
tsv
27
fastq
25
bed narrowPeak
22
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
362
liver
198
brain
190
heart
182
kidney
155
pancreas
132
vasculature
128
blood vessel
117
epithelium
91
limb
74
artery
71
connective tissue
54
blood
54
bodily fluid
46
musculature of body
27
nerve
18
ureter
14
embryo
14
spleen
12
vein
11
adipose tissue
8
bone element
8
skeleton
6
eye
1
pituitary gland
Project
25
AMP
Genome assembly (visualization)
27
hg19
25
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
spleen
12
1
1
omental fat pad
3
1
2
subcutaneous adipose tissue
2
1
adipose tissue
1
adipose tissue(adipose white tissue)
1
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