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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
13
DNA binding
Target of assay
9
transcription factor
4
chromatin remodeller
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
1
RNA binding protein
Date released
5
August, 2017
3
November, 2017
3
October, 2017
2
November, 2018
Available data
13
bam
13
bigWig
13
fastq
8
bed narrowPeak
8
bigBed narrowPeak
3
tagAlign
2
bed broadPeak
Organism
13
Homo sapiens
Biosample type
5
cell line
5
in vitro differentiated cells
3
tissue
Organ
pancreas
21
epithelium
17
connective tissue
adipose tissue
5
liver
3
brain
Project
13
AMP
Genome assembly (visualization)
20
hg19
13
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
4
inconsistent control read length
4
inconsistent control run_type
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
cell line
HepG2
5
in vitro differentiated cells
adipocyte
5
tissue
brain
3
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