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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
100
histone modification
99
histone
51
narrow histone mark
47
broad histone mark
46
transcription factor
7
RNA binding protein
3
chromatin remodeller
2
control
Date released
58
May, 2019
50
October, 2019
47
August, 2017
45
November, 2017
44
May, 2021
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
8
February, 2018
8
June, 2019
7
August, 2021
6
November, 2019
5
October, 2017
January, 2019
Available data
47
bam
47
bigWig
47
fastq
42
bed narrowPeak
16
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
5
bigBed broadPeak
Organism
44
Homo sapiens
Biosample type
20
tissue
15
primary cell
12
in vitro differentiated cells
Organ
23
pancreas
12
connective tissue
7
liver
6
epithelium
Project
47
AMP
Genome assembly (visualization)
59
hg19
47
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
month_released!
January, 2019
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
tissue
liver
7
pancreas
7
islet of Langerhans
6
primary cell
skeletal muscle myoblast
5
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
in vitro differentiated cells
adipocyte
12
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