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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
3
ATAC-seq
2
total RNA-seq
Assay category
50
Transcription
3
DNA accessibility
Date released
233
August, 2017
206
November, 2017
74
November, 2018
72
September, 2018
66
December, 2017
50
July, 2018
44
April, 2018
32
October, 2018
30
December, 2018
29
February, 2018
26
January, 2019
14
October, 2017
7
August, 2020
7
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
Available data
167
bigWig
164
bam
164
tsv
53
fastq
Organism
53
Homo sapiens
Biosample type
51
primary cell
2
tissue
Organ
42
pancreas
36
epithelium
2
connective tissue
Project
50
AMP
3
HPAP
Genome assembly (visualization)
53
GRCh38
50
hg19
Lab
50
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
53 results
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single cell RNA-seq
ATAC-seq
total RNA-seq
primary cell
pancreatic beta cell
9
1
pancreatic alpha cell
7
2
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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tissue
islet of Langerhans
2
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