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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
10
ATAC-seq
1
Hi-C
Assay category
45
Transcription
10
DNA accessibility
1
3D chromatin structure
Date released
May, 2021
45
May, 2020
7
August, 2020
3
September, 2020
1
March, 2023
Available data
55
bigWig
45
bam
45
tsv
10
fastq
1
hic
Organism
56
Homo sapiens
Biosample type
118
tissue
56
primary cell
Organ
10
epithelium
10
pancreas
Project
45
T1D
10
HPAP
1
ITG
Genome assembly (visualization)
56
GRCh38
48
hg19
Lab
AMP-T2D consortium
45
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
1
ITG
Audit category:
4
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
lab.title!
AMP-T2D consortium
month_released!
May, 2021
BIOSAMPLE
ASSAY
56 results
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total RNA-seq
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
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