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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
4
DNase-seq
Assay category
56
DNA binding
4
DNA accessibility
Target of assay
52
transcription factor
11
RNA binding protein
10
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
6
June, 2019
Available data
60
bam
60
bed narrowPeak
60
bigBed narrowPeak
60
bigWig
54
fastq
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
60
Homo sapiens
Biosample type
54
cell line
3
primary cell
3
tissue
Organ
635
pancreas
566
connective tissue
525
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
60
AMP
Genome assembly (visualization)
89
hg19
60
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
inconsistent control
audit.WARNING.category!
inconsistent control run_type
files.file_type!
vcf
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
GM12878
54
primary cell
retinal pigment epithelial cell
2
1
tissue
retina
3
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