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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 98total RNA-seq
  • 88ChIP-seq
  • 10ATAC-seq
  • 1Hi-C
Assay category
  • 98Transcription
  • 88DNA binding
  • 10DNA accessibility
  • 13D chromatin structure
Target of assay
  • 88histone
  • 88histone modification
  • 44broad histone mark
  • 44narrow histone mark
Date released
  • 136May, 2021
  • 45May, 2020
  • 7August, 2020
  • 5March, 2020
  • 3September, 2020
  • 1March, 2023
Available data
  • 196bigWig
  • 186bam
  • 98tsv
  • 88bed narrowPeak
  • 84tagAlign
  • 10fastq
  • 1hic
Organism
  • 197Homo sapiens
Biosample type
  • 191primary cell
  • 4cell line
  • 2tissue
Organ
  • 16pancreas
  • 14epithelium
Project
  • AMP
  • 186T1D
  • 10HPAP
  • 1ITG
Genome assembly (visualization)
  • 197GRCh38
  • 189hg19
Lab
  • 180Kyle Gaulton, UCSD
  • 10Klaus Kaestner, Upenn
  • 6AMP-T2D consortium
  • 1ITG
Audit category:
  • 8inconsistent ontology term
award.project!
  • AMP
BIOSAMPLE
ASSAY

197 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
Hi-C
primary cell
monocyte5384
pancreatic alpha cell7
pancreatic beta cell3
B cell2
CD8-positive, alpha-beta T cell2
cell line
EndoC_BH122
tissue
islet of Langerhans2
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