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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
ATAC-seq
Assay category
14
DNA binding
1
DNA accessibility
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
Date released
6
August, 2017
5
November, 2017
4
October, 2017
Available data
2928
bam
2899
bigWig
1605
bed narrowPeak
1396
tsv
972
bigBed narrowPeak
951
fastq
280
bed broadPeak
bigBed broadPeak
256
bed bed3+
246
tagAlign
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
1
tagAlign bed3+
Organism
9
Homo sapiens
Biosample type
15
tissue
Organ
8
brain
7
pancreas
Project
15
AMP
Genome assembly (visualization)
36
hg19
15
GRCh38
Lab
14
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
missing controlled_by
Audit category:
1
inconsistent assembly
award.project!
LungMap
files.file_type!
bigBed broadPeak
organ_slims!
nerve
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
ATAC-seq
tissue
pancreas
6
brain
3
middle frontal area 46
2
caudate nucleus
1
cingulate gyrus
1
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