Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
40
ChIP-seq
1
Hi-C
Assay category
81
DNA accessibility
40
DNA binding
1
3D chromatin structure
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
40
May, 2024
11
May, 2023
August, 2020
3
September, 2020
2
March, 2019
1
March, 2023
1
October, 2017
Available data
104
bed narrowPeak
64
xls
44
bigWig
4
fastq
1
bed broadPeak
1
hic
Organism
122
Homo sapiens
Biosample type
118
tissue
4
primary cell
Organ
75
kidney
40
heart
6
pancreas
3
epithelium
Project
T1D
118
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
122
GRCh38
108
hg19
Lab
AMP-T2D consortium
75
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
ITG
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
award.project!
T1D
lab.title!
AMP-T2D consortium
month_released!
August, 2020
BIOSAMPLE
ASSAY
122 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
kidney
75
left cardiac atrium
40
islet of Langerhans
3
primary cell
pancreatic alpha cell
2
chondrocytes
1
pancreatic beta cell
1
Download