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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ATAC-seq
5
ChIP-seq
1
Hi-C
Assay category
88
DNA accessibility
5
DNA binding
1
3D chromatin structure
Target of assay
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
64
August, 2021
11
May, 2023
7
August, 2020
5
May, 2024
3
September, 2020
2
March, 2019
1
March, 2023
1
October, 2017
Available data
69
bed narrowPeak
64
xls
16
bigWig
11
fastq
1
bed broadPeak
1
hic
Organism
94
Homo sapiens
Biosample type
83
tissue
11
primary cell
Organ
75
kidney
13
pancreas
10
epithelium
5
heart
Project
T1D
83
AMP
10
HPAP
1
ITG
Genome assembly (visualization)
94
GRCh38
75
hg19
Lab
AMP-T2D consortium
75
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
1
ITG
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
award.project!
T1D
lab.title!
AMP-T2D consortium
organ_slims!
blood vessel
target.investigated_as!
histone
BIOSAMPLE
ASSAY
94 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
kidney
75
left cardiac atrium
5
islet of Langerhans
3
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
chondrocytes
1
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